All functions

check_format()

Detect format of the file

count_kmer()

count the number of times a kmer is present in a region

depth()

Estimate approximate depth for each position in a given region

extract_genotypes()

extract the genotypes for a given region from the GT field

extract_info()

extract values from the INFO field

extract_sequence()

Extract the sequences for a given region

gc_content()

Calculate the GC content for a region

htslib_version()

print htslib version

htslibr-package

A Wrapper for htslib